SORA

Advancing, promoting and sharing knowledge of health through excellence in teaching, clinical practice and research into the prevention and treatment of illness

Genome-wide analysis in over 1 million individuals of European ancestry yields improved polygenic risk scores for blood pressure traits

Keaton, JM; Kamali, Z; Xie, T; Vaez, A; Williams, A; Goleva, SB; Ani, A; Evangelou, E; Hellwege, JN; Yengo, L; et al. Keaton, JM; Kamali, Z; Xie, T; Vaez, A; Williams, A; Goleva, SB; Ani, A; Evangelou, E; Hellwege, JN; Yengo, L; Young, WJ; Traylor, M; Giri, A; Zheng, Z; Zeng, J; Chasman, DI; Morris, AP; Caulfield, MJ; Hwang, S-J; Kooner, JS; Conen, D; Attia, JR; Morrison, AC; Loos, RJF; Kristiansson, K; Schmidt, R; Hicks, AA; Pramstaller, PP; Nelson, CP; Samani, NJ; Risch, L; Gyllensten, U; Melander, O; Riese, H; Wilson, JF; Campbell, H; Rich, SS; Psaty, BM; Lu, Y; Rotter, JI; Guo, X; Rice, KM; Vollenweider, P; Sundström, J; Langenberg, C; Tobin, MD; Giedraitis, V; Luan, J; Tuomilehto, J; Kutalik, Z; Ripatti, S; Salomaa, V; Girotto, G; Trompet, S; Jukema, JW; van der Harst, P; Ridker, PM; Giulianini, F; Vitart, V; Goel, A; Watkins, H; Harris, SE; Deary, IJ; van der Most, PJ; Oldehinkel, AJ; Keavney, BD; Hayward, C; Campbell, A; Boehnke, M; Scott, LJ; Boutin, T; Mamasoula, C; Järvelin, M-R; Peters, A; Gieger, C; Lakatta, EG; Cucca, F; Hui, J; Knekt, P; Enroth, S; De Borst, MH; Polašek, O; Pina Concas, M; Catamo, E; Cocca, M; Li-Gao, R; Hofer, E; Schmidt, H; Spedicati, B; Waldenberger, M; Strachan, DP; Laan, M; Teumer, A; Dörr, M; Gudnason, V; Cook, JP; Ruggiero, D; Kolcic, I; Boerwinkle, E; Traglia, M; Lehtimäki, T; Raitakari, OT; Johnson, AD; Newton-Cheh, C; Brown, MJ; Dominiczak, AF; Sever, PJ; Poulter, N; Chambers, JC; Elosua, R; Siscovick, D; Esko, T; Metspalu, A; Strawbridge, RJ; Laakso, M; Hamsten, A; Hottenga, J-J; de Geus, E; Morris, AD; Palmer, CNA; Nolte, IJ; Milaneschi, Y; Marten, J; Wright, A; Zeggini, E; Howson, JMM; O'Donnell, CJ; Spector, T; Nalls, MA; Simonsick, EM; Liu, Y; van Duijn, CM; Butterworth, AS; Danesh, JN; Menni, C; Wareham, NJ; Khaw, K-T; Sun, YV; Wilson, PWF; Cho, K; Visscher, PM; Denny, JC; Million Veteran Program; Lifelines Cohort Study; CHARGE Consortium; ICBP Consortium; Levy, D; Edwards, TL; Munroe, PB; Snieder, H; Warren, HR (2024) Genome-wide analysis in over 1 million individuals of European ancestry yields improved polygenic risk scores for blood pressure traits. Nature Genetics, 56 (5). pp. 778-791. ISSN 1061-4036 https://doi.org/10.1038/s41588-024-01714-w
SGUL Authors: Strachan, David Peter

[img]
Preview
PDF Published Version
Available under License Creative Commons Attribution.

Download (3MB) | Preview
[img]
Preview
PDF (Supplementary Notes and Figs. 1–23) Supplemental Material
Download (16MB) | Preview
[img]
Preview
PDF (Reporting Summary) Supplemental Material
Download (93kB) | Preview
[img] Microsoft Excel (Supplementary Tables 1–26) Supplemental Material
Download (9MB)

Abstract

Hypertension affects more than one billion people worldwide. Here we identify 113 novel loci, reporting a total of 2,103 independent genetic signals (P < 5 × 10−8) from the largest single-stage blood pressure (BP) genome-wide association study to date (n = 1,028,980 European individuals). These associations explain more than 60% of single nucleotide polymorphism-based BP heritability. Comparing top versus bottom deciles of polygenic risk scores (PRSs) reveals clinically meaningful differences in BP (16.9 mmHg systolic BP, 95% CI, 15.5–18.2 mmHg, P = 2.22 × 10−126) and more than a sevenfold higher odds of hypertension risk (odds ratio, 7.33; 95% CI, 5.54–9.70; P = 4.13 × 10−44) in an independent dataset. Adding PRS into hypertension-prediction models increased the area under the receiver operating characteristic curve (AUROC) from 0.791 (95% CI, 0.781–0.801) to 0.826 (95% CI, 0.817–0.836, ∆AUROC, 0.035, P = 1.98 × 10−34). We compare the 2,103 loci results in non-European ancestries and show significant PRS associations in a large African-American sample. Secondary analyses implicate 500 genes previously unreported for BP. Our study highlights the role of increasingly large genomic studies for precision health research.

Item Type: Article
Additional Information: Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. © The Author(s) 2024
Keywords: 06 Biological Sciences, 11 Medical and Health Sciences, Developmental Biology
SGUL Research Institute / Research Centre: Academic Structure > Population Health Research Institute (INPH)
Journal or Publication Title: Nature Genetics
ISSN: 1061-4036
Dates:
DateEvent
May 2024Published
30 April 2024Published Online
11 March 2024Accepted
Publisher License: Creative Commons: Attribution 4.0
Projects:
Project IDFunderFunder ID
K12HD04348National Institute of Child Health and Human Developmenthttp://dx.doi.org/10.13039/100000071
2014-2020.4.01.15-0012European UnionUNSPECIFIED
PRG1291Estonian Research Councilhttp://dx.doi.org/10.13039/501100002301
SP/13/2/30111British Heart Foundationhttp://dx.doi.org/10.13039/501100000274
MC_PC_20029UK Research and Innovationhttp://dx.doi.org/10.13039/100014013
MC_PC_20058UK Research and Innovationhttp://dx.doi.org/10.13039/100014013
1S10RR025141-01Instrumentation awardUNSPECIFIED
UL1TR000445National Center for Advancing Translational Scienceshttp://dx.doi.org/10.13039/100006108
1S10OD023680-01Instrumentation awardUNSPECIFIED
HL105756National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
HHSN268201200036CNational Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
HHSN268200800007CNational Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
HHSN268201800001CNational Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01HC55222National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01HC85079National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01HC85080National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01HC85081National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01HC85082National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01HC85083National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01HC85086National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
75N92021D00006National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
U01HL080295National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
R01HL087652National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
R01HL105756National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
R01HL103612National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
R01HL120393National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
U01HL130114National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
R01AG023629National Institute on Aginghttp://dx.doi.org/10.13039/100000049
UL1TR001881National Center for Advancing Translational Scienceshttp://dx.doi.org/10.13039/100006108
DK063491National Institute of Diabetes and Digestive and Kidney Diseaseshttp://dx.doi.org/10.13039/100000050
75N92020D00001National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
HHSN268201500003INational Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95159National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
75N92020D00005National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95160National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
75N92020D00002National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95161National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
75N92020D00003National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95162National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
75N92020D00006National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95163National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
75N92020D00004National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95164National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
75N92020D00007National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95165National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95166National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95167National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95168National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N01-HC-95169National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
UL1-TR-000040National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
UL1-TR-001079National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
UL1-TR-001420National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
UL1TR001881National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
DK063491National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
R01HL105756National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
N02-HL-64278National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
Z01 HG200417National Human Genome Research Institutehttp://dx.doi.org/10.13039/100000051
Z01 AG000535National Institute on Aginghttp://dx.doi.org/10.13039/100000049
LSHG-CT-2006-018947European Commission Framework 6UNSPECIFIED
8875Croatian Science FoundationUNSPECIFIED
216-1080315-0302Republic of Croatia Ministry of Science, Education and SportsUNSPECIFIED
KK.01.1.1.01.0010Croatian National Center of Research Excellence in Personalized HealthcareUNSPECIFIED
KK.01.2.2.03.0006Center of Competence in Molecular DiagnosticsUNSPECIFIED
322098Academy of FinlandUNSPECIFIED
286284Academy of FinlandUNSPECIFIED
134309 (Eye)Academy of FinlandUNSPECIFIED
126925Academy of FinlandUNSPECIFIED
121584Academy of FinlandUNSPECIFIED
124282Academy of FinlandUNSPECIFIED
255381Academy of FinlandUNSPECIFIED
256474Academy of FinlandUNSPECIFIED
283115Academy of FinlandUNSPECIFIED
319060Academy of FinlandUNSPECIFIED
320297Academy of FinlandUNSPECIFIED
314389Academy of FinlandUNSPECIFIED
338395Academy of FinlandUNSPECIFIED
330809Academy of FinlandUNSPECIFIED
104821Academy of FinlandUNSPECIFIED
129378 (Salve)Academy of FinlandUNSPECIFIED
117797 (Gendi)Academy of FinlandUNSPECIFIED
141071 (Skidi)Academy of FinlandUNSPECIFIED
X51001Competitive State Research Financing of the Expert Responsibility area of Kuopio, Tampere and Turku University HospitalsUNSPECIFIED
755320Horizon 2020http://dx.doi.org/10.13039/501100007601
742927Horizon 2020http://dx.doi.org/10.13039/501100007601
CH/13/2/30154British Heart Foundationhttp://dx.doi.org/10.13039/501100000274
HL043851National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
HL080467National Heart, Lung, and Blood Institutehttp://dx.doi.org/10.13039/100000050
CA047988National Cancer Institutehttp://dx.doi.org/10.13039/100000054
UM1CA182913National Cancer Institutehttp://dx.doi.org/10.13039/100000054
BB/W008793/1Biotechnology and Biological Sciences Research Councilhttp://dx.doi.org/10.13039/501100000268
BB/F019394/1Biotechnology and Biological Sciences Research Councilhttp://dx.doi.org/10.13039/501100000268
3400581Isfahan University of Medical Scienceshttp://dx.doi.org/10.13039/501100003970
ISF140100108Iran’s National Elites FoundationUNSPECIFIED
BX004821Million Veteran ProgramUNSPECIFIED
URI: https://openaccess.sgul.ac.uk/id/eprint/115938
Publisher's version: https://doi.org/10.1038/s41588-024-01714-w

Actions (login required)

Edit Item Edit Item