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Brain tumor classification using the diffusion tensor image segmentation (D-SEG) technique.

Jones, TL; Byrnes, TJ; Yang, G; Howe, FA; Bell, BA; Barrick, TR (2015) Brain tumor classification using the diffusion tensor image segmentation (D-SEG) technique. Neuro Oncol, 17 (3). pp. 466-476. ISSN 1523-5866 https://doi.org/10.1093/neuonc/nou159
SGUL Authors: Barrick, Thomas Richard Howe, Franklyn Arron Yang, Guang

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Abstract

BACKGROUND: There is an increasing demand for noninvasive brain tumor biomarkers to guide surgery and subsequent oncotherapy. We present a novel whole-brain diffusion tensor imaging (DTI) segmentation (D-SEG) to delineate tumor volumes of interest (VOIs) for subsequent classification of tumor type. D-SEG uses isotropic (p) and anisotropic (q) components of the diffusion tensor to segment regions with similar diffusion characteristics. METHODS: DTI scans were acquired from 95 patients with low- and high-grade glioma, metastases, and meningioma and from 29 healthy subjects. D-SEG uses k-means clustering of the 2D (p,q) space to generate segments with different isotropic and anisotropic diffusion characteristics. RESULTS: Our results are visualized using a novel RGB color scheme incorporating p, q and T2-weighted information within each segment. The volumetric contribution of each segment to gray matter, white matter, and cerebrospinal fluid spaces was used to generate healthy tissue D-SEG spectra. Tumor VOIs were extracted using a semiautomated flood-filling technique and D-SEG spectra were computed within the VOI. Classification of tumor type using D-SEG spectra was performed using support vector machines. D-SEG was computationally fast and stable and delineated regions of healthy tissue from tumor and edema. D-SEG spectra were consistent for each tumor type, with constituent diffusion characteristics potentially reflecting regional differences in tissue microstructure. Support vector machines classified tumor type with an overall accuracy of 94.7%, providing better classification than previously reported. CONCLUSIONS: D-SEG presents a user-friendly, semiautomated biomarker that may provide a valuable adjunct in noninvasive brain tumor diagnosis and treatment planning.

Item Type: Article
Additional Information: © The Author(s) 2014. Published by Oxford University Press on behalf of the Society for Neuro-Oncology. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
Keywords: biomarker, brain tumor, diffusion tensor imaging, glioblastoma, segmentation, biomarker, brain tumor, diffusion tensor imaging, glioblastoma, segmentation, Oncology & Carcinogenesis, 1109 Neurosciences, 1112 Oncology And Carcinogenesis
SGUL Research Institute / Research Centre: Academic Structure > Molecular and Clinical Sciences Research Institute (MCS)
Academic Structure > Molecular and Clinical Sciences Research Institute (MCS) > Neuroscience (INCCNS)
Journal or Publication Title: Neuro Oncol
ISSN: 1523-5866
Language: eng
Dates:
DateEvent
March 2015Published
13 August 2014Published Online
7 July 2014Accepted
Publisher License: Creative Commons: Attribution-Noncommercial 4.0
Projects:
Project IDFunderFunder ID
C8807/A3870Cancer Research UKhttp://dx.doi.org/10.13039/501100000289
C1459/A13303Cancer Research UKhttp://dx.doi.org/10.13039/501100000289
LSHC-CT-2004-503094EUUNSPECIFIED
PubMed ID: 25121771
Web of Science ID: WOS:000352479700019
Go to PubMed abstract
URI: https://openaccess.sgul.ac.uk/id/eprint/107441
Publisher's version: https://doi.org/10.1093/neuonc/nou159

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