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Automated retinal image quality assessment on the UK Biobank dataset for epidemiological studies.

Welikala, RA; Fraz, MM; Foster, PJ; Whincup, PH; Rudnicka, AR; Owen, CG; Strachan, DP; Barman, SA; UK Biobank Eye and Vision Consortium, UKBEVC (2016) Automated retinal image quality assessment on the UK Biobank dataset for epidemiological studies. Computers in Biology and Medicine, 71. pp. 67-76. https://doi.org/10.1016/j.compbiomed.2016.01.027
SGUL Authors: Owen, Christopher Grant

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Abstract

Morphological changes in the retinal vascular network are associated with future risk of many systemic and vascular diseases. However, uncertainty over the presence and nature of some of these associations exists. Analysis of data from large population based studies will help to resolve these uncertainties. The QUARTZ (QUantitative Analysis of Retinal vessel Topology and siZe) retinal image analysis system allows automated processing of large numbers of retinal images. However, an image quality assessment module is needed to achieve full automation. In this paper, we propose such an algorithm, which uses the segmented vessel map to determine the suitability of retinal images for use in the creation of vessel morphometric data suitable for epidemiological studies. This includes an effective 3-dimensional feature set and support vector machine classification. A random subset of 800 retinal images from UK Biobank (a large prospective study of 500,000 middle aged adults; where 68,151 underwent retinal imaging) was used to examine the performance of the image quality algorithm. The algorithm achieved a sensitivity of 95.33% and a specificity of 91.13% for the detection of inadequate images. The strong performance of this image quality algorithm will make rapid automated analysis of vascular morphometry feasible on the entire UK Biobank dataset (and other large retinal datasets), with minimal operator involvement, and at low cost.

Item Type: Article
Additional Information: © 2016. This manuscript version is made available under the CC-BY-NC-ND 4.0 license http://creativecommons.org/licenses/by-nc-nd/4.0/
Keywords: Epidemiological studies, Image quality, Large retinal datasets, Retinal image, UK Biobank, Vessel segmentation, UK Biobank Eye and Vision Consortium, Biomedical Engineering, 08 Information And Computing Sciences, 11 Medical And Health Sciences, 17 Psychology And Cognitive Sciences
SGUL Research Institute / Research Centre: Academic Structure > Population Health Research Institute (INPH)
Journal or Publication Title: Computers in Biology and Medicine
Language: ENG
Dates:
DateEvent
6 February 2016Published
Publisher License: Creative Commons: Attribution-Noncommercial-No Derivative Works 4.0
Projects:
Project IDFunderFunder ID
MR/L02005X/1Medical Research Councilhttp://dx.doi.org/10.13039/501100000265
1507/08Fight for Sight UKhttp://dx.doi.org/10.13039/501100000615
PubMed ID: 26894596
Go to PubMed abstract
URI: https://openaccess.sgul.ac.uk/id/eprint/107734
Publisher's version: https://doi.org/10.1016/j.compbiomed.2016.01.027

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